23 std::vector<Region> result;
24 std::ranges::copy_if(group.
regions, std::back_inserter(result),
25 [&label](
const Region& region) {
26 return region.get_label() == label;
33 std::vector<Region> result;
34 std::ranges::copy_if(group.
regions, std::back_inserter(result),
35 [&key, &value](
const Region& region) {
36 auto attr_it = region.attributes.find(key);
37 if (attr_it != region.attributes.end()) {
38 if (value.type() == typeid(std::string)) {
39 auto region_value = get_region_attribute<std::string>(region, key);
40 auto search_value = std::any_cast<std::string>(value);
41 return region_value.has_value() && *region_value == search_value;
43 if (value.type() == typeid(double)) {
44 auto region_value = get_region_attribute<double>(region, key);
45 auto search_value = std::any_cast<double>(value);
46 return region_value.has_value() && *region_value == search_value;
48 if (value.type() == typeid(int)) {
49 auto region_value = get_region_attribute<int>(region, key);
50 auto search_value = std::any_cast<int>(value);
51 return region_value.has_value() && *region_value == search_value;
62 std::vector<Region> result;
63 std::ranges::copy_if(group.
regions, std::back_inserter(result),
64 [&coordinates](
const Region& region) {
65 return region.contains(coordinates);
73 for (
size_t i = 0; i < std::min(offset.size(), region.
start_coordinates.size()); ++i) {
83 for (
size_t i = 0; i < std::min(factors.size(), region.
start_coordinates.size()); ++i) {
86 auto new_half_span =
static_cast<uint64_t
>(factors[i] *
static_cast<double>(half_span));
97 auto min_coords = group.
regions.front().start_coordinates;
98 auto max_coords = group.
regions.front().end_coordinates;
100 for (
const auto& region : group.
regions) {
101 for (
size_t i = 0; i < min_coords.size() && i < region.start_coordinates.size(); ++i) {
102 min_coords[i] = std::min(min_coords[i], region.start_coordinates[i]);
104 for (
size_t i = 0; i < max_coords.size() && i < region.end_coordinates.size(); ++i) {
105 max_coords[i] = std::max(max_coords[i], region.end_coordinates[i]);
109 Region bounds(min_coords, max_coords);
116 std::ranges::sort(regions,
118 if (dimension <
a.start_coordinates.size() && dimension <
b.start_coordinates.size())
119 return a.start_coordinates[dimension] <
b.start_coordinates[dimension];
126 std::ranges::sort(regions,
128 auto aval = get_region_attribute<std::string>(
a, attr_name);
129 auto bval = get_region_attribute<std::string>(
b, attr_name);
130 return aval.value_or(
"") < bval.value_or(
"");
136 refs.emplace_back(name, region);
141 auto to_remove = std::ranges::remove_if(refs,
142 [&name](
const auto& pair) {
return pair.first == name; });
143 refs.erase(to_remove.begin(), to_remove.end());
146std::optional<Region>
get_reference_region(
const std::vector<std::pair<std::string, Region>>& refs,
const std::string& name)
148 auto it = std::ranges::find_if(refs,
149 [&name](
const auto& pair) {
return pair.first == name; });
150 if (it != refs.end())
156 const std::vector<std::pair<std::string, Region>>& refs,
const Region& region)
158 std::vector<std::pair<std::string, Region>> result;
160 std::ranges::copy_if(refs, std::back_inserter(result),
161 [®ion](
const auto& pair) {
return region.
contains(pair.second.start_coordinates); });
167 groups[group.
name] = group;
170std::optional<RegionGroup>
get_region_group(
const std::unordered_map<std::string, RegionGroup>& groups,
const std::string& name)
172 auto it = groups.find(name);
173 if (it != groups.end())
184 const std::vector<uint64_t>& output_shape)
186 if (current_pos.size() != output_shape.size()) {
187 error<std::invalid_argument>(
188 Journal::Component::Kakshya, Journal::Context::Runtime,
189 std::source_location::current(),
190 "Position and shape vectors must have same size: current_pos size = "
191 + std::to_string(current_pos.size()) +
", output_shape size = "
192 + std::to_string(output_shape.size()));
195 std::vector<uint64_t> end_pos;
196 end_pos.reserve(current_pos.size());
198 for (
size_t i = 0; i < current_pos.size(); ++i) {
199 if (output_shape[i] == 0) {
200 error<std::invalid_argument>(
201 Journal::Component::Kakshya, Journal::Context::Runtime,
202 std::source_location::current(),
203 "Output shape cannot have zero dimensions: dimension " + std::to_string(i) +
" is zero");
205 end_pos.push_back(current_pos[i] + output_shape[i] - 1);
208 return { current_pos, end_pos };
212 uint64_t frames_to_process,
213 const std::shared_ptr<SignalSourceContainer>& container)
215 const auto& structure = container->get_structure();
216 uint64_t total_frames = structure.get_samples_count_per_channel();
217 uint64_t num_channels = structure.get_channel_count();
219 if (current_frame >= total_frames) {
220 error<std::out_of_range>(
221 Journal::Component::Kakshya, Journal::Context::Runtime,
222 std::source_location::current(),
223 "Current frame exceeds container bounds: current_frame = "
224 + std::to_string(current_frame) +
", total_frames = "
225 + std::to_string(total_frames));
228 uint64_t available_frames = total_frames - current_frame;
229 uint64_t actual_frames = std::min(frames_to_process, available_frames);
233 output_shape.
end_coordinates = { current_frame + actual_frames - 1, num_channels - 1 };
239 const std::shared_ptr<SignalSourceContainer>& container)
245 const auto dimensions = container->get_dimensions();
246 const auto memory_layout = container->get_memory_layout();
251 if (memory_layout == MemoryLayout::ROW_MAJOR) {
253 size_t last_dim = dimensions.size() - 1;
256 }
else if (memory_layout == MemoryLayout::COLUMN_MAJOR) {
265std::vector<std::unordered_map<std::string, std::any>>
extract_all_regions_info(
const std::shared_ptr<SignalSourceContainer>& container)
268 error<std::invalid_argument>(
269 Journal::Component::Kakshya, Journal::Context::Runtime,
270 std::source_location::current(),
271 "Container is null");
274 auto all_groups = container->get_all_region_groups();
275 std::vector<std::unordered_map<std::string, std::any>> regions_info;
277 for (
const auto& [group_name, group] : all_groups) {
278 for (
size_t i = 0; i < group.regions.size(); ++i) {
279 const auto& region = group.regions[i];
281 std::unordered_map<std::string, std::any> region_info;
282 region_info[
"group_name"] = group_name;
283 region_info[
"region_index"] = i;
284 region_info[
"start_coordinates"] = region.start_coordinates;
285 region_info[
"end_coordinates"] = region.end_coordinates;
286 region_info[
"attributes"] = region.attributes;
288 regions_info.push_back(std::move(region_info));
297 std::unordered_map<std::string, std::any> bounds_info;
303 const auto& first_region = group.
regions[0];
304 std::vector<uint64_t> min_coords = first_region.start_coordinates;
305 std::vector<uint64_t> max_coords = first_region.end_coordinates;
307 for (
size_t i = 1; i < group.
regions.size(); ++i) {
308 const auto& region = group.
regions[i];
310 for (
size_t j = 0; j < min_coords.size() && j < region.start_coordinates.size(); ++j) {
311 min_coords[j] = std::min(min_coords[j], region.start_coordinates[j]);
314 for (
size_t j = 0; j < max_coords.size() && j < region.end_coordinates.size(); ++j) {
315 max_coords[j] = std::max(max_coords[j], region.end_coordinates[j]);
319 bounds_info[
"group_name"] = group.
name;
320 bounds_info[
"num_regions"] = group.
regions.size();
321 bounds_info[
"bounding_min"] = min_coords;
322 bounds_info[
"bounding_max"] = max_coords;
323 bounds_info[
"group_attributes"] = group.
attributes;
330 std::vector<std::unordered_map<std::string, std::any>> metadata_list;
331 metadata_list.reserve(segments.size());
333 for (
const auto& segment : segments) {
334 std::unordered_map<std::string, std::any> segment_info;
335 segment_info[
"start_coordinates"] = segment.source_region.start_coordinates;
336 segment_info[
"end_coordinates"] = segment.source_region.end_coordinates;
337 segment_info[
"region_attributes"] = segment.source_region.attributes;
338 segment_info[
"segment_attributes"] = segment.processing_metadata;
340 metadata_list.push_back(std::move(segment_info));
343 return metadata_list;
348 std::unordered_map<std::string, std::any> bounds_info;
352 std::vector<uint64_t> sizes;
358 bounds_info[
"sizes"] = sizes;
360 uint64_t total_elements = 1;
361 for (uint64_t size : sizes) {
362 total_elements *= size;
364 bounds_info[
"total_elements"] = total_elements;
370 const std::vector<Region>& regions)
372 for (
size_t i = 0; i < regions.size(); ++i) {
373 if (regions[i].contains(position)) {
382 for (
size_t i = 0; i < regions.size(); ++i) {
383 if (regions[i].contains_position(position)) {
394 for (
long i = 0; i < dimensions.size(); ++i) {
395 if (dimensions[i].role == DataDimension::Role::CHANNEL) {
407 std::vector<DataDimension> result;
408 std::ranges::copy_if(dimensions, std::back_inserter(result),
410 return dim.
role != DataDimension::Role::CHANNEL;
417 const size_t ndim = std::min({ r1.start_coordinates.size(),
418 r1.end_coordinates.size(),
419 r2.start_coordinates.size(),
420 r2.end_coordinates.size() });
424 for (
size_t i = 0; i < ndim; ++i) {
425 if (r1.end_coordinates[i] < r2.start_coordinates[i]
426 || r2.end_coordinates[i] < r1.start_coordinates[i])
void set_region_attribute(Region ®ion, const std::string &key, std::any value)
Set an attribute value on a Region.
Region remove_channel_dimension(const Region ®ion, const std::vector< DataDimension > &dimensions)
Remove the channel dimension from a Region.
void sort_regions_by_attribute(std::vector< Region > ®ions, const std::string &attr_name)
Sort a vector of Regions by a specific attribute (numeric).
std::optional< RegionGroup > get_region_group(const std::unordered_map< std::string, RegionGroup > &groups, const std::string &name)
Get a RegionGroup by name from a group map.
std::vector< Region > find_regions_with_label(const RegionGroup &group, const std::string &label)
Find all regions in a RegionGroup with a given label.
bool is_region_access_contiguous(const Region ®ion, const std::shared_ptr< SignalSourceContainer > &container)
Check if region access will be contiguous in memory.
std::unordered_map< std::string, std::any > extract_region_bounds_info(const Region ®ion)
Extract structured bounds information from region.
void add_reference_region(std::vector< std::pair< std::string, Region > > &refs, const std::string &name, const Region ®ion)
Add a named reference region to a reference list.
Region translate_region(const Region ®ion, const std::vector< int64_t > &offset)
Translate a Region by an offset vector.
void add_region_group(std::unordered_map< std::string, RegionGroup > &groups, const RegionGroup &group)
Add a RegionGroup to a group map.
Region scale_region(const Region ®ion, const std::vector< double > &factors)
Scale a Region about its center by the given factors.
bool regions_intersect(const Region &r1, const Region &r2) noexcept
Test whether two N-dimensional regions overlap on every shared axis.
std::vector< std::unordered_map< std::string, std::any > > extract_segments_metadata(const std::vector< RegionSegment > &segments)
Extract metadata from region segments.
void remove_region_group(std::unordered_map< std::string, RegionGroup > &groups, const std::string &name)
Remove a RegionGroup by name from a group map.
std::unordered_map< std::string, std::any > extract_group_bounds_info(const RegionGroup &group)
Extract bounds information from region group.
std::vector< Region > find_regions_containing_coordinates(const RegionGroup &group, const std::vector< uint64_t > &coordinates)
Find all regions in a RegionGroup that contain the given coordinates.
void remove_reference_region(std::vector< std::pair< std::string, Region > > &refs, const std::string &name)
Remove a named reference region from a reference list.
std::vector< Region > find_regions_with_attribute(const RegionGroup &group, const std::string &key, const std::any &value)
Find all regions in a RegionGroup with a specific attribute value.
std::vector< std::unordered_map< std::string, std::any > > extract_all_regions_info(const std::shared_ptr< SignalSourceContainer > &container)
Extract all regions from container's region groups.
Region get_bounding_region(const RegionGroup &group)
Get the bounding region that contains all regions in a RegionGroup.
std::vector< std::pair< std::string, Region > > find_references_in_region(const std::vector< std::pair< std::string, Region > > &refs, const Region ®ion)
Find all references in a reference list that overlap a given region.
std::optional< size_t > find_region_for_position(const std::vector< uint64_t > &position, const std::vector< Region > ®ions)
Find optimal region containing given position.
Region calculate_output_region(const std::vector< uint64_t > ¤t_pos, const std::vector< uint64_t > &output_shape)
Calculate output region bounds from current position and shape.
std::optional< Region > get_reference_region(const std::vector< std::pair< std::string, Region > > &refs, const std::string &name)
Get a named reference region from a reference list.
std::vector< DataDimension > get_non_channel_dimensions(const std::vector< DataDimension > &dimensions)
Get all non-channel dimensions from a list of dimensions.
void sort_regions_by_dimension(std::vector< Region > ®ions, size_t dimension)
Sort a vector of Regions by a specific dimension.
Role role
Semantic hint for common operations.
Minimal dimension descriptor focusing on structure only.
std::unordered_map< std::string, std::any > attributes
Flexible key-value store for group-specific attributes.
std::vector< Region > regions
Collection of regions belonging to this group.
std::string name
Descriptive name of the group.
Organizes related signal regions into a categorized collection.
std::unordered_map< std::string, std::any > attributes
Flexible key-value store for region-specific attributes.
std::vector< uint64_t > end_coordinates
Ending frame index (inclusive)
std::vector< uint64_t > start_coordinates
Starting frame index (inclusive)
bool contains(const std::vector< uint64_t > &coordinates) const
Check if the given coordinates are contained within this region.
Represents a point or span in N-dimensional space.